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Kīlauea lava fuels phytoplankton bloom off Hawai’i Island

Kīlauea lava entry on the southeast coastline of Hawai'i Island as seen from UH research vessel Kaimikai o Kanaloa. Credit: Ryan Tabata, UH.
Kīlauea lava entry on the southeast coastline of Hawai’i Island as seen from UH research vessel Kaimikai o Kanaloa. Credit: Ryan Tabata, UH.

When Kīlauea Volcano erupted in 2018, it injected millions of cubic feet of molten lava into the nutrient-poor waters off the Big Island of Hawai’i. The lava-impacted seawater contained high concentrations of nutrients that stimulated phytoplankton growth, resulting in an extensive plume of microbes that was detectable by satellite.

A study led by researchers at the University of Hawai’i (UH) at Mānoa and University of Southern California (USC) and published today in the journal Science revealed that this biological response hinged on unexpectedly high concentrations of nitrate, despite the negligible amount of nitrogen in basaltic lava. The research team determined that nitrate was brought to the surface ocean when heat from the substantial input of lava into the ocean warmed nutrient-rich deep waters and caused them to rise up, supplying the sunlit layer with nutrients.

After observing the phytoplankton bloom in satellite images, the UH Mānoa Center for Microbial Oceanography: Research and Education (C-MORE) organized a rapid response oceanographic expedition on UH research vessel Ka’imikai-O-Kanaloa from July 13 to 17, 2018—in the thick of Kilauea’s activity. The team conducted round-the-clock operations in the vicinity of the lava entry region to test water chemistry and the biological response to the dramatic event.

Co-lead authors Sam Wilson at C-MORE and Nick Hawco, a USC researcher who will be joining the UH Mānoa Oceanography Department in January 2020, tested the hypothesis that lava and volcanic dust would stimulate microorganisms that are limited by phosphate or iron, which are chemicals found in lava.

As it turned out, since there was so much lava in the water, the dissolved iron and phosphate combined into particles, making those nutrients unavailable for microbes. Further, deep, heated seawater became buoyant and brought up nitrate which caused other classes of phytoplankton to bloom.

It is possible that this mechanism has led to similar ocean fertilization events in the past associated with the formation of the Hawaiian Islands and other significant volcanic eruptions, the authors suggest. Depending on their location, sustained eruption on this scale could also facilitate a large flux of nitrate from the deep ocean and perturb larger scale ocean circulation, biology and chemistry.

“The expedition in July 2018 provided a unique opportunity to see first-hand how a massive input of external nutrients alters marine ecosystems that are finely attuned to low-nutrient conditions,” said Wilson. “Ecosystem responses to such a substantial addition of nutrients are rarely observed or sampled in real time. UH has a strong tradition of not only volcanic research, but also looking at its impacts on the surrounding environment such as the ocean, groundwater, atmosphere. This latest piece of research improves our understanding of lava-seawater interactions within the much broader context of land-ocean connections.”

“Science is a team sport,” said Dave Karl, senior author and co-director of the UH Mānoa Simons Collaboration on Ocean Processes and Ecology (SCOPE). “SCOPE emphasizes collaboration, where scientists with complementary skills came together to complete this unique, interdisciplinary project.”

In the future, the team hopes to sample the newly-formed ponds at the bottom of the Halema’uma’u crater and further investigate lava-seawater interactions in the laboratory.

Reference:
S.T. Wilson el al., “Kīlauea lava fuels phytoplankton bloom in the North Pacific Ocean,” Science (2019). science.sciencemag.org/lookup/ … 1126/science.aax4767

H. Ducklow el al., “Volcano-stimulated marine photosynthesis,” Science (2019). science.sciencemag.org/cgi/doi … 1126/science.aay8088

Note: The above post is reprinted from materials provided by University of Hawaii at Manoa.

Scientists Confirm The Discovery of a Mineral Never Before Seen in Nature

The Wedderburn meteorite. (Museums Victoria/CC BY 4.0)
The Wedderburn meteorite. (Museums Victoria/CC BY 4.0)

Wedderburn meteorite

Scientists have discovered a new mineral, one never before seen in nature, lodged inside a meteorite found near Wedderburn in central Victoria.

They believe that the mineral was probably forged in an ancient planet’s molten core, long since destroyed.

The meteorite from its million-year-plus journey is red and black and deeply scarred, and certainly looks like the part. Edscottite has been christened the mineral it includes.

After close examination of the Wedderburn Meteorite, a lemon-sized chunk of metal found just outside Wedderburn in 1951, the mineral was found and is now part of the collection of Museums Victoria.

It was discovered in a distant Australian gold rush city on the side of a highway. Wedderburn was a hotspot for prospectors in the ancient days–it’s still ##lies–but no one ever saw a nugget like this.

The Wedderburn meteorite, discovered in 1951 just north-east of the city, was a tiny 210-gram piece of strange-looking space rock falling from the heavens. Scientists have tried to decipher their secrets for centuries, and researchers have just decoded another.

Scientists analyzed the Wedderburn meteorite and checked the first natural appearance of what they call’ edscottite’ in a fresh research conducted by Caltech mineralogist Chi Ma: a unusual type of iron-carbide mineral that has never been discovered in existence.

Since the spatial origins of the Wedderburn meteorite were first identified, numerous research teams have examined the distinctive black-and-red rock–to the extent that only about one-third of the original specimen remains intact, held in Australia’s Museums Victoria Geological Collection.

In a sequence of pieces, the remainder were removed to analyze what the meteorite is made of. These analyzes disclosed gold and iron traces along with rarer minerals such as kamacite, schreibersite, taenite, and troilite. Now edscottite can be added to that list.

The finding of edscottite–named in honor of the University of Hawaii’s meteorite specialist and cosmochemist Edward Scott–is important because we have never before verified that this separate nuclear formulation of iron carbide mineral happens naturally.

Such a confirmation is important as it is a prerequisite for the International Mineralogical Association (IMA) to formally recognize minerals as such.

For centuries, a synthesized form of the mineral iron carbide has been considered –a stage generated during metal smelting.

But thanks to Chi Ma and UCLA’s new analysis of geophysicist Alan Rubin, edscottite is now an official member of the mineral club of the IMA, which is more exclusive than you might believe.

“We found 500,000 to 600,000 minerals in the laboratory, but less than 6,000 that nature itself did,” Museums Victoria senior geoscience curator Stuart Mills, who was not involved in the new study, told The Age.

As for how this sliver of natural edscottite ended up just outside rural Wedderburn can’t be known for sure, but according to planetary scientist Geoffrey Bonning from Australian National University, who wasn’t engaged in the research, the mineral could have developed in an ancestral planet’s warm, pressurized heart.

Bonning informed The Age that this ill-fated, edscottite-producing planet might have endured some sort of huge cosmic crash–involving another planet, or a moon, or an object–and was torn apart, with the fractured pieces of this demolished globe flowing through moment and space.

Millions of years ago, thought continues, one such piece lands just outside Wedderburn by opportunity–and for it, our knowledge of the Universe is the richest.

Reference:
Edscottite, Fe5C2, a new iron carbide mineral from the Ni-rich Wedderburn IAB iron meteorite. DOI: 10.2138/am-2019-7102

T. rex had an air conditioner in its head

A graphic thermal image of a T. rex with its dorsotemporal fenestra glowing on the skull. Illustration courtesy of Brian Engh.
A graphic thermal image of a T. rex with its dorsotemporal fenestra glowing on the skull. Illustration courtesy of Brian Engh.

Tyrannosaurus rex, one of the largest meat-eating dinosaurs on the planet, had an air conditioner in its head, suggest scientists from the University of Missouri, Ohio University and University of Florida, while challenging over a century of previous beliefs.

In the past, scientists believed two large holes in the roof of a T. rex’s skull — called the dorsotemporal fenestra — were filled with muscles that assist with jaw movements.

But that assertion puzzled Casey Holliday, a professor of anatomy in the MU School of Medicine and lead researcher on the study.

“It’s really weird for a muscle to come up from the jaw, make a 90-degree turn, and go along the roof of the skull,” Holliday said. “Yet, we now have a lot of compelling evidence for blood vessels in this area, based on our work with alligators and other reptiles.”

Using thermal imaging — devices that translate heat into visible light — researchers examined alligators at the St. Augustine Alligator Farm Zoological Park in Florida. They believe their evidence offers a new theory and insight into the anatomy of a T. rex’s head.

“An alligator’s body heat depends on its environment,” said Kent Vliet, coordinator of laboratories at the University of Florida’s Department of Biology. “Therefore, we noticed when it was cooler and the alligators are trying to warm up, our thermal imaging showed big hot spots in these holes in the roof of their skull, indicating a rise in temperature. Yet, later in the day when it’s warmer, the holes appear dark, like they were turned off to keep cool. This is consistent with prior evidence that alligators have a cross-current circulatory system — or an internal thermostat, so to speak.”

Holliday and his team took their thermal imaging data and examined fossilized remains of dinosaurs and crocodiles to see how this hole in the skull changed over time.

“We know that, similarly to the T. rex, alligators have holes on the roof of their skulls, and they are filled with blood vessels,” said Larry Witmer, professor of anatomy at Ohio University’s Heritage College of Osteopathic Medicine. “Yet, for over 100 years we’ve been putting muscles into a similar space with dinosaurs. By using some anatomy and physiology of current animals, we can show that we can overturn those early hypotheses about the anatomy of this part of the T. rex’s skull.”

Reference:
Casey M. Holliday, William Ruger Porter, Kent A. Vliet, Lawrence M. Witmer. The Frontoparietal Fossa and Dorsotemporal Fenestra of Archosaurs and Their Significance for Interpretations of Vascular and Muscular Anatomy in Dinosaurs. The Anatomical Record, 2019; DOI: 10.1002/ar.24218

Note: The above post is reprinted from materials provided by University of Missouri-Columbia.

What drives plate tectonics?

Global paleomagnetic plate reconstructions a. 270 Ma, b. 180 Ma, and inset the Present Tethyan Realm. Credit: ©Science China Press
Global paleomagnetic plate reconstructions a. 270 Ma, b. 180 Ma, and inset the Present Tethyan Realm. Credit: ©Science China Press

Plate tectonics was founded in the late 1960s, and it concerns the distribution and movements of plates, the uppermost layer of the Earth. Plate movements not only control the distributions of earthquakes, volcanoes, and mineral resources in the crust, but also affect the ocean and atmospheric circulations above the crust. Therefore, plate tectonics has been regarded as the fundamental unifying paradigm for understanding the history of Earth.

Despite the widely accepted kinematics of plate tectonics, the driving force of plate tectonics is still one of the most challenging problems since the birth of this theory. The subduction of oceanic slabs is considered the dominant driving force based on observations of Cenozoic subduction systems along the circum-Pacific region. However, the difficulty in observing the oceanic subduction slabs beneath collisional orogens hampers the ability to quantitatively evaluate the role of subducting oceanic slabs. Alternative driving forces such as ridge push, continental slab-pull, plume upwelling and large-scale mantle convection have been proposed at different subduction-collision belts along the Tethyan Realm (Fig 1), the largest continental collisional zone. The Tethyan evolution can be summarized as the process by which many continental fragments were ruptured sequentially from Gondwana and then drift towards Laurasia/Eurasia.

Scientists from the State Key Laboratory of Lithospheric Evolution, Institute of Geology and Geophysics, Chinese Academy of Sciences in Beijing found “switches” between continental rupture, continental collision, and oceanic subduction initiation in the Tethyan evolution after a reappraisal of geological records from the surface and new global-scale geophysical images at depth. They proposed that the “switches” were all controlled by oceanic subductions. All oceanic Tethyan slabs acted in a way that transferred the Gondwana-detached continents in the south into the terminal in the north, so they depicted the scenario as a “Tethyan one-way train” (Figure. 2a and b). The engine of the “train” was the negative buoyancy of the subducting oceanic slabs. The results also shed light on supercontinent assembly and breakup cycles. Subductions not only assemble the supercontinent but also effectively break-up the supercontinent.

The new results will not close the discussions on driving force of plate tectonics, but future Tethyan research may test the new proposal and improve the understanding of how plate tectonics works.

Reference:
Bo Wan et al, Cyclical one-way continental rupture-drift in the Tethyan evolution: Subduction-driven plate tectonics, Science China Earth Sciences (2019). DOI: 10.1007/s11430-019-9393-4

Note: The above post is reprinted from materials provided by Science China Press.

Understanding the link between fracking and earthquakes

Hydraulic fracturing (Creative Commons photo)
Hydraulic fracturing (Creative Commons photo)

Researchers studying hydraulic fracturing have answered a longstanding question over how the practice can sometimes cause moderate earthquakes and may be able to use their model to forecast when quakes linked to fracking might occur.

The team of seismologists and geophysicists from Dalhousie University and the University of Calgary conducted a new study aimed at understanding the physical mechanisms of earthquakes “induced” by hydraulic fracturing, a widely used method to stimulate extraction of hydrocarbons from the ground.

They wanted to understand why these events were occurring, in spite of laboratory measurements suggesting they shouldn’t happen in the type of shale rock undergoing stimulation.

What they found is that the injection of fracturing fluids can lead to a slow slip on a fault. That can gradually put enough strain on another, distant section of the fault to cause it to slip suddenly and produce an earthquake.

Possibilities for new monitoring and mitigation strategies

Dmitry Garagash, a professor in the Civil and Resource Engineering Department at Dalhousie, co-authored the study that was published in Science Advances, a top-tier online journal of the American Association for the Advancement of Science.

“Work like this allows us to understand the phenomenon better and may ultimately lead to improved regulations and practices of hydraulic fracturing,” said Dr. Garagash.

“The developed physics-based model of fault slip in response to changes caused by fracking can lead to better prediction of this type of events, but also suggest new field monitoring and mitigation strategies.”

The team was led by Dr. Thomas Eyre, a postdoctoral researcher in the Department of Geoscience at the University of Calgary, and looked at so-called “felt events” or earthquakes that are large enough to be felt in nearby communities.

That included a magnitude 4.2 earthquake earlier this year near Red Deer, Alta., and a 4.5 quake last year near Fort St. John, B.C.

The researchers analyzed a set of seismic and geological data, some of which were collected during a magnitude 4.1 hydraulic fracturing-induced earthquake on Jan. 12, 2016, near Fox Creek in northwest Alberta.

An important milestone

Hydraulic fracturing involves pumping a mixture of water, sand and chemicals into a well bore under high pressure to create fractures in reservoir rocks to exploit them for oil and gas.

“This is an important new milestone for understanding earthquakes caused by hydraulic fracturing,” says study co-author Dr. David Eaton, a professor in the University of Calgary’s Department of Geoscience.

Dr. Eyre said that based on the research team’s model, corroborated by field observations and by physics-based mathematical modeling, the earthquake initiates on a distant part of the fault where friction conditions are unstable.

“In the case we studied, the earthquake occurred hundreds of meters above the hydraulic fracturing zone,” Dr. Eyre said.

Previous studies have suggested that fault slip in shale formations targeted by fracking occurs too slowly to produce an earthquake. But the new research found that this slow slip can alter the conditions on the fault a distance away from the site of fracking and cause a distant quake.

Reference:
Thomas S. Eyre et al. The role of aseismic slip in hydraulic fracturing–induced seismicity, Science Advances (2019). DOI: 10.1126/sciadv.aav7172

Note: The above post is reprinted from materials provided by Dalhousie University.

Ancient animal species: Fossils dating back 550 million years among first animal trails

A fossilized trail of the animal Yilingia spiciformis, dating back 550 million years. The trail was found in China by a team of scientists including Shuhai Xiao of the Virginia Tech College of Science. Credit: Virginia Tech College of Science
A fossilized trail of the animal Yilingia spiciformis, dating back 550 million years. The trail was found in China by a team of scientists including Shuhai Xiao of the Virginia Tech College of Science. Credit: Virginia Tech College of Science

In a remarkable evolutionary discovery, a team of scientists co-led by a Virginia Tech geoscientist has discovered what could be among the first trails made by animals on the surface of the Earth roughly a half-billion years ago.

Shuhai Xiao, a professor of geosciences with the Virginia Tech College of Science, calls the unearthed fossils, including the bodies and trails left by an ancient animal species, the most convincing sign of ancient animal mobility, dating back about 550 million years. Named Yilingia spiciformis—that translates to spiky Yiling bug, Yiling being the Chinese city near the discovery site—the animal was found in multiple layers of rock by Xiao and Zhe Chen, Chuanming Zhou, and Xunlai Yuan from the Chinese Academy of Sciences’ Nanjing Institute of Geology and Palaeontology.

The findings are published in the latest issue of Nature. The trials are from the same rock unit and are roughly the same age as bug-like footprints found by Xiao and his team in a series of digs from 2013 to 2018 in the Yangtze Gorges area of southern China, and date back to the Ediacaran Period, well before the age of dinosaurs or even the Pangea supercontinent. What sets this find apart: The preserved fossil of the animal that made the trail versus the unknowable guesswork where the body has not been preserved.

“This discovery shows that segmented and mobile animals evolved by 550 million years ago,” Xiao said. “Mobility made it possible for animals to make an unmistakable footprint on Earth, both literally and metaphorically. Those are the kind of features you find in a group of animals called bilaterans. This group includes us humans and most animals. Animals and particularly humans are movers and shakers on Earth. Their ability to shape the face of the planet is ultimately tied to the origin of animal motility.”

The animal was a millipede-like creature a quarter-inch to an inch wide and up to 4 inches long that alternately dragged its body across the muddy ocean floor and rested along the way, leaving trails as loing as 23 inches. The animal was an elongated narrow creature, with 50 or so body segments, a left and right side, a back and belly, and a head and a tail.

The origin of bilaterally symmetric animals—known as bilaterians—with segmented bodies and directional mobility is a monumental event in early animal evolution, and is estimated to have occurred the Ediacaran Period, between 635 and 539 million years ago. But until this finding by Xiao and his team, there was no convincing fossil evidence to substantiate those estimates. One of the recovered specimens is particularly vital because the animal and the trail it produced just before its death are preserved together.

Remarkably, the find also marks what may be the first sign of decision making among animals—the trails suggest an effort to move toward or away from something, perhaps under the direction of a sophisticated central nerve system, Xiao said. The mobility of animals led to environmental and ecological impacts on the Earth surface system and ultimately led to the Cambrian substrate and agronomic revolutions, he said.

“We are the most impactful animal on Earth,” added Xiao, also an affiliated member of the Global Change Center at Virginia Tech. “We make a huge footprint, not only from locomotion, but in many other and more impactful activities related to our ability to move. When and how animal locomotion evolved defines an important geological and evolutionary context of anthropogenic impact on the surface of the Earth.”

Rachel Wood, a professor in the School of GeoSciences at University of Edinburgh in Scotland, who was not involved with the study, said, “This is a remarkable finding of highly significant fossils. We now have evidence that segmented animals were present and had gained an ability to move across the sea floor before the Cambrian, and more notably we can tie the actual trace-maker to the trace. Such preservation is unusual and provides considerable insight into a major step in the evolution of animals.”

Reference:
Death march of a segmented and trilobate bilaterian elucidates early animal evolution, Nature (2019). DOI: 10.1038/s41586-019-1522-7

Note: The above post is reprinted from materials provided by Virginia Tech.

A new reptile species from Wales named by Bristol student

The type specimen of Aenigmaspina pantyfynnonensis, photograph and 3D scan model, produced by Erin Patrick as part of her Masters thesis work in Bristol. This little block, the size of the palm of your hand, shows the backbone, curved round from top right to bottom left, and in the middle the ribs and shoulder blades. Scale bar is 1 cm. Credit: University of Bristol
The type specimen of Aenigmaspina pantyfynnonensis, photograph and 3D scan model, produced by Erin Patrick as part of her Masters thesis work in Bristol. This little block, the size of the palm of your hand, shows the backbone, curved round from top right to bottom left, and in the middle the ribs and shoulder blades. Scale bar is 1 cm. Credit: University of Bristol

After resting for decades in the storerooms of the Natural History Museum in London, a fragmentary fossil from the Late Triassic (200 million years ago) has been named as a new species by a Masters’ student at the University of Bristol.

Erin Patrick studied this creature for her MSc Palaeobiology dissertation research under the supervision of Professor Mike Benton and Dr. David Whiteside from Bristol’s School of Earth Sciences.

The fossil is one of several novel species named from Pant-y-ffynnon Quarry in Wales. It was found in the 1950s but has been ignored since then because it was so tiny and hard to study.

Most of the specimen is in two blocks of rock that fit together to form a lump that would sit on a child’s hand. On the surface are small bones, but it revealed its treasures when it was scanned. While no skull is present, these blocks contain a number of vertebrae, ribs, one scapula, and tiny armor plates from its back.

Using CT scanning, these tiny bones (some mere millimeters wide and long) could be studied in three-dimensional detail, allowing Erin to examine fossils otherwise hidden in the rock.

When she first saw the scans, Erin commented: “I was amazed. The rock and small fossils looked like nothing in particular, but the scans showed up fantastic detail. I worked on the images at ten times magnification to see all the minute features.”

When the fossil was found, its discoverers dubbed it “Edgar,” but as a new species it has now been given the formal name Aenigmaspina pantyffynnonensis.

The first part of the name refers to its enigmatic spine table, a feature of the vertebrae that supported the armor plates on the back. The second part of the name refers to Pant-y-ffynnon quarry in South Wales where it was found.

Erin added: “While creating the 3-D models, I was looking for anatomical features that would say what this new beast was.

“We could see it wasn’t a dinosaur, and the spine tables and armor plates put it on the crocodile side of the evolutionary tree.

“During the Triassic, there was a flurry of different reptile groups emerging related to modern crocodiles, but most of these were pretty huge and had special features not present in Aenigmaspina.”

Professor Benton said: “We were able to code Aenigmaspina for 100 or so characters and calculate its most likely position in the tree of life, but the answers were not 100 percent certain. It seems to be a relative of another little armored beast called Erpetosuchus known from the Late Triassic of north-east Scotland and the eastern United States.”

Dr. Whiteside said: “Erin’s work has added important knowledge to our understanding of Late Triassic faunas worldwide and particularly to the animals present in South Wales during that time.

“We know that Aenigmaspina lived on a small limestone island, part of a sub-tropical archipelago and this brings the number of major new species described from Pant-y-ffynnon quarry to four, two of which have been named by Bristol Masters students.”

Reference:
Erin L. Patrick et al. A new crurotarsan archosaur from the Late Triassic of South Wales, Journal of Vertebrate Paleontology (2019). DOI: 10.1080/02724634.2019.1645147

Note: The above post is reprinted from materials provided by University of Bristol.

Earthquake study casts doubt on early warnings but hints at improved forecasting

Map of seismic sensors (green triangles) around the epicenter (red star) of one of the earthquakes near the city of Tsukuba, Ibaraki Prefecture. Credit: 2019 Satoshi Ide
Map of seismic sensors (green triangles) around the epicenter (red star) of one of the earthquakes near the city of Tsukuba, Ibaraki Prefecture. Credit: 2019 Satoshi Ide

A recent study has investigated around 100,000 localized seismic events to search for patterns in the data. University of Tokyo Professor Satoshi Ide discovered that earthquakes of differing magnitudes have more in common than was previously thought. This suggests development of early warning systems may be more difficult than hoped. But conversely, similarities between some events indicate that predictable characteristics may aid researchers attempting to forecast seismic events.

Since the 1980s, seismologists have wondered how feasible it might be to predict how an earthquake will behave given some information about its initial conditions—in particular, whether the eventual magnitude could be determined based on seismic measurements near the epicenter. Most researchers consider this idea improbable, given the randomness of earthquake behavior, but Ide thinks there’s more to it than that.

“Taking inspiration from a study comparing different-sized earthquakes, I decided to analyze a seismic dataset from a region known as the Tohoku-Hokkaido subduction zone in eastern Japan,” said Ide. “A systematic comparison of around 100,000 seismic events over 15 years leads me to believe earthquakes are not different in random ways but share many similarities.”

To draw comparisons between earthquakes, Ide first selected the larger examples from the dataset with magnitudes greater than 4.5. He also selected smaller earthquakes in the same regions as these larger ones. Ide then ascertained mathematically how similar seismic signals were between pairs of large and small earthquakes. He used a statistical function for the comparison of signals called a cross-correlation on data from 10 seismic stations close to the pairs of earthquakes in each case.

“Some pairs of large and small earthquakes start with exactly the same shaking characteristics, so we cannot tell the magnitude of an earthquake from initial seismic observations,” explained Ide. “This is bad news for earthquake early warning. However, for future forecasting attempts, given this symmetry between earthquakes of different magnitudes, it is good to know they are not completely random.”

The study is published in Nature.

Reference:
Frequent observations of identical onsets of large and small earthquakes, Nature (2019). DOI: 10.1038/s41586-019-1508-5

Note: The above post is reprinted from materials provided by University of Tokyo.

Analyzing the world’s oldest woody plant fossil

A, photograph of Armoricaphyton chateaupannense preserved in 2D as carbonaceous thin films. B, SEM image of a transverse section of an axis of a specimen of A. chateaupannense preserved in 3D showing the radially aligned tracheids. Credit: Canadian Light Source
A, photograph of Armoricaphyton chateaupannense preserved in 2D as carbonaceous thin films. B, SEM image of a transverse section of an axis of a specimen of A. chateaupannense preserved in 3D showing the radially aligned tracheids. Credit: Canadian Light Source

Mapping the evolution of life on Earth requires a detailed understanding of the fossil record, and scientists are using synchrotron-based technologies to look back—way, way back—at the cell structure and chemistry of the earliest known woody plant.

Dr. Christine Strullu-Derrien and colleagues used the Canadian Light Source’s SM beamline at the University of Saskatchewan to study Armoricaphyton chateaupannense, an extinct woody plant that is about 400 million years old. Their research focused on lignin, an organic compound in the plant tracheids, elongated cells that help transport water and mineral salts. Lignin makes the cells walls rigid and less water permeable, thereby improving the conductivity of their vascular system.

Strullu-Derrien, a scientific associate at the Natural History Museum in London, England and the Natural History Museum in Paris, France, had described A. chateaupannense some years ago and returned to it for this project.

“Studies have been done previously on Devonian plants but they were not woody,” she said. “A. chateaupannense is the earliest known woody plant and it’s preserved in both 2-D form as flat carbonaceous films and 3-D organo-mineral structures. This allows for comparison to be done between the two types of preservation,” she said.

Although the fossils used in the study were collected in the Armorican Massif, a geologically significant region of hills and flatlands in western France, Strullu-Derrien said early Devonian woody plants have also been found in New Brunswick and the Gaspé area in Quebec “although these are 10 million years younger than the French one.”

One of the challenges in this kind of study is that the fossilization process modifies soft plant tissue, which alters or obscures its original biochemical structure and makes it difficult to precisely reconstruct the original chemistry. This study, however, aided by advanced visualization technologies, identified lignified cells in the fossils, suggesting the plant contained decay-resistant lignin compounds.

“Analyses show that both the 2-D and 3-D fossils have the same chemical composition, which is different than modern lignin, but the chemical signal of lignin is not completely lost in the fossilization process,” she said. Although the type of preservation of the plant fossils is not unique, “the combination of synchrotron methods used to study the structure and the chemistry of the wood at this level of detail is novel.”

The results of the research are in a paper entitled “On the Structure and Chemistry of Fossils of the Earliest Woody Plant,” published by Palaeontology.

Given how ubiquitous and important wood is as a structural component of modern plants, Strullu-Derrien’s investigation advances the knowledge around when and how wood first evolved. Yet, questions remain: “Wood first appears in small plants but did it have a different function than it does today in trees, for example?” posed Strullu-Derrien.

To find an answer, she will apply the same techniques used in this study on plants of other geological ages “to follow the evolution of their structure and to be able to find when, or in what condition of preservation, the remaining organic matter has kept a chemical signal of lignin.”

“Our study illustrates the capabilities of synchrotrons to investigate the early evolution of tissue systems in plants. It’s crucial to have access to these techniques to reach the level of resolution needed for getting chemical signals such as lignin. This represents a developing and promising area for the study of fossils that will complement the morpho-anatomical data and help to interpret the structures,” she said.

Reference:
Christine Strullu‐Derrien et al. On the structure and chemistry of fossils of the earliest woody plant, Palaeontology (2019). DOI: 10.1111/pala.12440

Note: The above post is reprinted from materials provided by Canadian Light Source.

Fossil colour studies are changing our idea of how dinosaurs looked

In-depth fossil analysis could help us understand the true functions of colour. Credit: Aline Dassel/Pixabay, licensed under Pixabay licence
In-depth fossil analysis could help us understand the true functions of colour. Credit: Aline Dassel/Pixabay, licensed under Pixabay licence

What colour were the dinosaurs? If you have a picture in your head, fresh studies suggest you may need to revise it. New fossil research also suggests that pigment-producing structures go beyond how the dinosaurs looked and may have played a fundamental role inside their bodies too.

The latest findings have also paved the way for a more accurate reconstruction of the internal anatomy of extinct animals, and insight into the origins of features such as feathers and flight.

Much of this stems from investigations into melanin, a pigment found in structures called melanosomes inside cells that gives external features including hair, feather, skin and eyes their colour—and which, it now turns out, is abundant inside animals’ bodies too.

“We’ve found it in places where we didn’t think it existed,” said Dr. Maria McNamara, a palaeobiologist at University College Cork in Ireland. “We’ve found melanosomes in lungs, the heart, liver, spleen, connective tissues, kidneys… They’re pretty much everywhere.”

The discoveries in her team’s newest research, published in mid-August, were made using advanced microscopy and synchrotron X-ray techniques, which harness the energy of fast-moving electrons to help examine fossils in minute detail.

Using these, the researchers found that melanin was widespread in the internal organs of both modern and fossil amphibians, reptiles, birds and mammals—following up a finding they made last year that melanosomes in the body of existing and fossil frogs in fact vastly outnumbered those found externally.

What’s more, they were surprised to discover that the chemical make-up and shape of the melanosomes varied between organ types—thus opening up exciting opportunities to use them to map the soft tissues of ancient animals.

Secondary

These studies also have further implications. For one, the finding that melanosomes are so common inside animals’ bodies may overhaul our very understanding of melanin’s function, says Dr. McNamara. “There’s the potential that melanin didn’t evolve for colour at all,” she said. “That role may actually be secondary to much more important physiological functions.”

Her research indicates that it may have an important role in homeostasis, or regulation of the internal chemical and physical state of the body, and the balance of its metallic elements.

“A big question now is does this apply to the first, most primitive vertebrates?” said Dr. McNamara. “Can we find fossil evidence of this? Which function of melanin is evolutionarily primitive—production of colour or homeostasis?”

At the same time, the findings imply that we may need to review our understanding of the colours of ancient animals. That’s because fossil melanosomes previously assumed to represent external hues may in fact be from internal tissues, especially if the fossil has been disturbed over time.

Dr. McNamara says her research has also shown that melanosomes can change shape and shrink over the course of millions of years, potentially affecting colour reconstructions.

Further complicating the picture is that animals contain additional non-melanin pigments such as carotenoids and what is known as structural colour, which was only recently identified in fossils. In 2016, a study by Dr. McNamara’s team on the skin of a 10-million-year-old snake found that these could be preserved in certain mineralised remains.

“These have the potential to preserve all aspects of the colour-producing gamut that vertebrates have,” said Dr. McNamara.

She hopes over time that these findings and techniques will together help us to much more accurately interpret the colours of ancient organisms—though in these early days, she doesn’t have examples of animals for which this has already changed.

Deep time

Many of the significant strides in this area have come out of a project that Dr. McNamara leads called ANICOLEVO, which set out to look into the evolution of colour in animals over deep time—or hundreds of millions of years.

The project’s starting point was that previous animal colour studies largely omitted in-depth fossil analysis, leaving a significant gap by basing what we know about colour mainly on modern organisms.

But it has since led to even wider investigation. Dr. McNamara says it is providing fresh hints on the kinds of biological structures and processes that are essential for survival in terrestrial and aquatic environments. “It looks like we’ll be able to look into much broader, exciting questions about what it means to be an animal,” she said.

Part of her research on two fossils found in China even showed that flying reptiles known as pterosaurs had feathers, potentially taking the evolution of these structures back a further 80 million years to 250 million years ago. The fossils contained preserved melanosomes with diverse shapes and sizes, one of the tell-tale signs of feathers.

“We were able to show for the first time that not only were dinosaurs feathered, but an entirely different group of animals, the pterosaurs, also had feathers,” said Dr. McNamara.

Another project she worked on, called FOSSIL COLOUR, compared the chemistry of colour patterns between fossil and modern insects. Again, says Dr. McNamara, these don’t entirely map onto each other.

“It’s already clear that the fossilisation process has altered the chemistry somewhat, so we’re doing experiments to try to understand these changes.”

What’s evident is that there’s lots still to find out about colour. “We’re just at the tip of the iceberg when it comes to fossil colour research,” said Dr. McNamara.

Thermoregulation

Other researchers agree that there’s more to animal colour than meets the eye. Dr. Matthew Shawkey, an evolutionary biologist at Ghent University in Belgium, said that looking into properties and functions beyond colour’s use for visual means like signalling and camouflage will be critical to understanding its true significance.

“For example, how do colours affect thermoregulation? Flight? Such functions may be complementary to, or even more significant, than purely visual functions,” he said.

Dr. Shawkey is looking into such questions, with one of his recent studies indicating that the wing colour of birds may play an important role in flight efficiency by leading to different rates of heating.

“What started as a novelty of deciphering dinosaur colours has turned into a very serious field which is studying the origins of key pigment systems, how the evolution of colourful structures may have helped drive major evolutionary transitions like the origin of flight, and how colour is related to ecology and sexual selection,” said Dr. Steve Brusatte, a vertebrate palaeontologist and evolutionary biologist at the University of Edinburgh, UK.

Ultimately, we may be able to find out more about colour than once thought possible. “When I was growing up, so many of the dinosaur books I read in school said that we would never know what colour they were,” said Dr. Brusatte. “But as is so often the case in science, it was silly to treat this as impossible.”

He said he is excited to see what comes next, with the field just in its infancy: “Palaeontologists now have a whole new window into understanding the biology and evolution of long-extinct organisms.”

Note: The above post is reprinted from materials provided by Horizon: The EU Research & Innovation Magazine.

Ancient die-off greater than the dinosaur extinction

This photograph shows rocks from the Belcher Islands in Hudson Bay, Canada, from which doctoral candidate Malcolm Hodgskiss collected barite samples dating 2.02 to 1.87 billion years old. Credit: Malcolm Hodgskiss
This photograph shows rocks from the Belcher Islands in Hudson Bay, Canada, from which doctoral candidate Malcolm Hodgskiss collected barite samples dating 2.02 to 1.87 billion years old. Credit: Malcolm Hodgskiss

Clues from Canadian rocks formed billions of year ago reveal a previously unknown loss of life even greater than that of the mass extinction of the dinosaurs 65 million years ago, when Earth lost nearly three-quarters of its plant and animal species.

Rather than prowling animals, this die-off involved miniscule microorganisms that shaped the Earth’s atmosphere and ultimately paved the way for those larger animals to thrive.

“This shows that even when biology on Earth is comprised entirely of microbes, you can still have what could be considered an enormous die-off event that otherwise is not recorded in the fossil record,” said Malcolm Hodgskiss, co-lead author of a new study published in Proceedings of the National Academy of Sciences.

Invisible clues

Because this time period preceded complex life, researchers cannot simply dig up fossils to learn what was living 2 billion years ago. Even clues left behind in mud and rocks can be difficult to uncover and analyze.

Instead, the group turned to barite, a mineral collected from the Belcher Islands in Hudson Bay, Canada, that encapsulates a record of oxygen in the atmosphere. Those samples revealed that Earth experienced huge changes to its biosphere — the part of the planet occupied by living organisms — ending with an enormous drop in life approximately 2.05 billion years ago that may also be linked to declining oxygen levels.

“The fact that this geochemical signature was preserved was very surprising,” Hodgskiss said. “What was especially unusual about these barites is that they clearly had a complex history.”

Looking at the Earth’s productivity through ancient history provides a glimpse into how life is likely to behave over its entire existence — in addition to informing observations of atmospheres on planets outside our solar system.

“The size of the biosphere through geologic time has always been one of our biggest questions in studying the history of the Earth,” said Erik Sperling, an assistant professor of geological sciences at Stanford who was not involved with the study. “This new proxy demonstrates how interlinked the biosphere and levels of oxygen and carbon dioxide in the atmosphere are.”

Biological angle

This relationship between the proliferation of life and atmospheric oxygen has given researchers new evidence of the hypothesized “oxygen overshoot.” According to this theory, photosynthesis from ancient microorganisms and the weathering of rocks created a huge amount of oxygen in the atmosphere that later waned as oxygen-emitting organisms exhausted their nutrient supply in the ocean and became less abundant. This situation is in contrast to the stable atmosphere we know on Earth today, where the oxygen created and consumed balances out. The researchers’ measurements of oxygen, sulfur and barium isotopes in barite support this oxygen overshoot hypothesis.

The research helps scientists hone their estimates of the size of the oxygen overshoot by revealing the significant biological consequences of oxygen levels above or below the capacity of the planet.

“Some of these oxygen estimates likely require too many microorganisms living in the ocean in Earth’s past,” said co-lead author Peter Crockford, a postdoctoral researcher at the Weizmann Institute of Science and Princeton University. “So we can now start to narrow in on what the composition of the atmosphere could have been through this biological angle.”

The research was supported by Stanford University McGee and Compton Grants, the Northern Scientific Training Program, NSERC, National Geographic, the American Philosophical Society, Geological Society of America and the Agouron Institute.

Reference:
Malcolm S. W. Hodgskiss, Peter W. Crockford, Yongbo Peng, Boswell A. Wing, Tristan J. Horner. A productivity collapse to end Earth’s Great Oxidation. Proceedings of the National Academy of Sciences, 2019; 116 (35): 17207 DOI: 10.1073/pnas.1900325116

Note: The above post is reprinted from materials provided by Stanford’s School of Earth, Energy & Environmental Sciences.

The ‘universal break-up criterion’ of hot, flowing lava?

Lava fountains at Kilauea in Hawaii created a spatter cone, which was estimated to be 180 feet tall in this June 2018 photo. Credit: U.S. Geological Survey
Lava fountains at Kilauea in Hawaii created a spatter cone, which was estimated to be 180 feet tall in this June 2018 photo. Credit: U.S. Geological Survey

Thomas Jones’ “universal break-up criterion” won’t help with meltdowns of the heart, but it will help volcanologists study changing lava conditions in common volcanic eruptions.

Jones, of Rice University, studies the behavior of low-viscosity lava, the runny kind that’s found at most volcanoes. About two years ago, he began a series of lab experiments and field observations that provided the raw inputs for a new fluid dynamic model of lava break-up. The work is described in a paper in Nature Communications.

Low-viscosity lava is the red-hot, flowing type one might see at Hawaii’s famed Kilauea volcano, and Jones said it usually behaves in one of two ways.

“It can bubble or spew out, breaking into chunks that spatter about the vent, or it can flow smoothly, forming lava streams that can rapidly move downhill,” he said.

But that behavior can sometimes change quickly during the course of an eruption, and so can the associated dangers: While spattering eruptions throw hot lava fragments into the air, lava flows can threaten to destroy whole neighborhoods and towns.

Jones’ model, the first of its kind, allows scientists to calculate when an eruption will transition from a spattering spray to a flowing stream, based upon the liquid properties of the lava itself and the eruption conditions at the vent.

Jones said additional work is needed to refine the tool, and he looks forward to doing some of it himself.

“We will validate this by going to an active volcano, taking some high-speed videos and seeing when things break apart and under what conditions,” he said. “We also plan to look at the effect of adding bubbles and crystals, because real magmas aren’t as simple as the idealized liquid in our mathematical model. Real magmas can also have bubbles and crystals in them. I’m sure those will change things. We want to find out how.”

Jones said pairing the new model with real-time information about a lava’s liquid properties and eruption conditions could allow emergency officials to predict when an eruption will change style and become a hazard to at-risk communities.

“We want to use this as a forecasting tool for eruption behavior,” he said. “By developing a model of what’s happening in the subsurface we can then watch for indications that it’s about to cross the tipping point and change behavior.”

Reference:
T. J. Jones, C. D. Reynolds, S. C. Boothroyd. Fluid dynamic induced break-up during volcanic eruptions. Nature Communications, 2019; 10 (1) DOI: 10.1038/s41467-019-11750-4

Note: The above post is reprinted from materials provided by Rice University. Original written by Jade Boyd.

Filter-feeding pterosaurs were the flamingos of the Late Jurassic

The scans revealed many microscopic food remains including foraminifera (small amoeboid protists with external shells), small shells of marine invertebrates and possible remains of polychaete worms. Credit: Qvarnström mfl.
The scans revealed many microscopic food remains including foraminifera (small amoeboid protists with external shells), small shells of marine invertebrates and possible remains of polychaete worms. Credit: Qvarnström mfl.

Modern flamingoes employ filter feeding and their feces are, as a result, rich in remains of microscopically-small aquatic prey. Very similar contents are described from more than 150 million year old pterosaur droppings in a recent paper in PeerJ. This represents the first direct evidence of filter-feeding in Late Jurassic pterosaurs and demonstrates that their diet and feeding environment were similar to those of modern flamingoes.

Pterosaurs were a diverse group of flying reptiles that roamed the skies during the age of dinosaurs. Skeletal fossils suggest that they, just like modern birds, adapted to diverse lifestyles and feeding habits. Direct evidence on diets such as gut contents, however, are rare and only known from a few pterosaur species.

Coprolites, that is fossil droppings, are surprisingly common fossils and they potentially hold valuable information on the diet of extinct animals. Unfortunately, it is often difficult to know which animal produced which dropping.

In a recent paper, researchers from Uppsala University and the Polish Academy of Sciences describe the contents of three coprolites collected from a surface with abundant pterosaur footprints in the Wierzbica Quarry in Poland. The coprolites’ size, shape and association to the tracks suggest that they were produced by pterosaurs, most probably belonging to a group called Ctenochasmatidae.

The fossil droppings were scanned using synchrotron microtomography, which works in a similar way to a CT-scanner in a hospital but with much stronger x-ray beams. This makes it possible to image the contents of fossils in three dimensions. The scans of the pterosaur coprolites revealed many microscopic food remains including foraminifera (small amoeboid protists with external shells), small shells of marine invertebrates and possible remains of polychaete worms.

“A reasonable explanation for how a pterosaur big enough to have produced the droppings ingested such small prey is through filter feeding,” says Martin Qvarnström, PhD student at Uppsala University and one of the authors of the article.

Some ctenochasmid pterosaurs are thought to have been filter feeders. Pterodaustro, which comes from the Cretaceous and is thus slightly younger than the Polish coprolites, possessed a sieving basket consisting of many long, thin teeth and was certainly a filter feeder. Older ctenochasmids did not possess such an obvious sieving basket, but some had elongated snouts with many slender teeth, also interpreted as adaptations for filter feeding. These pterosaurs were around at the time the droppings were made, and as the footprints from the site have also been attributed to ctenochasmids it is likely that such pterosaurs produced both the droppings and the footprints.

The modern Chilean flamingo, which is a filter feeder, can produce droppings full of foraminifera when feeding in coastal wetlands.

“The similar contents of the droppings of these flamingos and the pterosaur coprolites could be explained by similar feeding environments and mesh sizes of the filter-feeding apparatus. It appears therefore that the pterosaurs which produced the footprints and droppings found in Poland were indeed the flamingos of the Late Jurassic,” says Martin Qvarnström.

Reference:
Martin Qvarnström, Erik Elgh, Krzysztof Owocki, Per E. Ahlberg, Grzegorz Niedźwiedzki. Filter feeding in Late Jurassic pterosaurs supported by coprolite contents. PeerJ, 2019; 7: e7375 DOI: 10.7717/peerj.7375

Note: The above post is reprinted from materials provided by Uppsala University.

Ancient Tsunamis: Deducing the scale of tsunamis from the ’roundness’ of deposited gravel

Scientists from Tokyo Metropolitan University and Ritsumeikan University have found a link between the “roundness” distribution of tsunami deposits and how far tsunamis reach inland. They sampled the “roundness” of gravel from different tsunamis in Koyadori, Japan, and found a common, abrupt change in composition approximately 40% of the “inundation distance” from the shoreline, regardless of tsunami magnitude. Estimates of ancient tsunami size from geological deposits may help inform effective disaster mitigation.

Tsunamis are one of nature’s most devastating hazards; understanding their scale and mechanism is of paramount scientific and socio-economic importance. Nevertheless, despite our best efforts to study and understand them, their infrequent occurrence can make quantitative studies difficult; tsunami-causing seismic events around subduction zones (where one tectonic plate dips underneath another plate) recur once every 100 to 1,000 years, significantly reducing the number of accurately documented events. It is highly desirable that we gain some understanding by looking at geological deposits instead. However, despite some success in finding the number and age of past events, it is not yet possible to estimate the magnitude of ancient tsunamis, particularly in narrow coastal lowlands like the Sanriku Coast in Japan, struck by the 2011 Tohoku earthquake and tsunami.

Therefore, Assistant Professor Daisuke Ishimura from Tokyo Metropolitan University and Postdoctoral Fellow Keitaro Yamada from Ritsumeikan University carried out studies of gravel samples collected from bore holes and the trench in Koyadori, situated in the middle of the Sanriku coastline. Geological samples were taken corresponding to three tsunami events (AD 1611, 1896 and 2011) whose magnitudes are known, specifically their “inundation distance,” or how far they reach inland. They used automated image analysis to study how “round” each gravel particle was in their samples, giving 10 to 100 times more data than existing, manual methods. Comparing distributions with measurements of modern beach and fluvial (river) gravels, they found that they could map the number ratio between beach and fluvial gravel. They discovered that this ratio suddenly changed at a certain distance away from the sea. This point was named the “Tsunami Gravel Inflection Point” (TGIP); it is thought to arise from “run-up” (incoming) waves bringing beach material inland and “return” waves drawing inland material towards the sea. Although the TGIP occurred at different locations for each event, they found that it was always approximately 40% of the inundation distance. They applied this finding to samples corresponding to even older tsunamis, providing estimates for the size of events along the Sanriku Coast going back approximately 4,000 years for the first time.

Although the researchers believe this ratio is specific to the local topography, the same analysis may be applied to characterize other tsunami-prone locations. An accurate estimate of the extent of ancient tsunamis will expand the number of events available for future research to study the mechanisms behind tsunamis, helping to inform effective disaster mitigation and the planning of coastal communities.

Reference:
Daisuke Ishimura, Keitaro Yamada. Palaeo-tsunami inundation distances deduced from roundness of gravel particles in tsunami deposits. Scientific Reports, 2019; 9 (1) DOI: 10.1038/s41598-019-46584-z

Note: The above post is reprinted from materials provided by Tokyo Metropolitan University.

Detecting hydrothermal vents in volcanic lakes

Steep crater wall of Ngozi volcano in the Poroto Ridge Forest Reserve, Tanzania. Credit: Egbert Jolie/GFZ
Steep crater wall of Ngozi volcano in the Poroto Ridge Forest Reserve, Tanzania. Credit: Egbert Jolie/GFZ

Geothermal manifestations at Earth’s surface can be mapped and characterized by a variety of well-established exploration methods. However, mapping hydrothermal vents in aquatic environments is more challenging as conventional methods can no longer be applied. In fact, chemical composition of lake water may indicate inflow of fluids from a volcanic system, but it does not provide spatial information on the location of hydrothermal vents, their abundance and current state of activity.

Changes in the behaviour of hydrothermal vents may be indicative of changes in the volcanic system underneath, thus being a useful precursor for the next generation of early warning systems. Increased volcanic activity beneath volcanic lakes could also trigger increased gas input, in particular CO2, which could again result in catastrophic gas outbursts as reported from Lake Nyos or Lake Monoun in Cameroon. New exploration approaches will help improving site-specific risk assessment and monitoring concepts by taking a closer look at hydrothermal vents.

The study describes an integrated approach of (1) bathymetry, (2) thermal mapping of the lake floor, and (3) gas emission measurements at the water surface, which was tested successfully at Lake Ngozi in Tanzania. Multiple hydrothermal feed zones could be identified by hole-like structures and increased lake floor temperatures, in combination with increased CO2 emissions from the lake surface. The developed approach has the advantage that (1) it does not require a complex technical setup, (2) data can be obtained in-situ, and (3) it is transferable to other volcanic lakes for mapping hydrothermal feed sources.

Further research activities at volcanic lakes and in shallow marine environments with hydrothermal activity (e.g., Iceland, Italy) are currently in preparation with partners from the Scientific Diving Centre (SDC) at the Technical University Bergakademie Freiberg, Germany, and the Marine & Freshwater Research Institute in Reykjavík, Iceland. This will also include research related to future offshore geothermal exploration.

Data related to this study have been collected complementary to a geothermal exploration project, which was coordinated by the author, who has previously been with BGR in Hanover, Germany.

Reference:
Egbert Jolie. Detecting gas-rich hydrothermal vents in Ngozi Crater Lake using integrated exploration tools. Scientific Reports, 2019; 9 (1) DOI: 10.1038/s41598-019-48576-5

Note: The above post is reprinted from materials provided by GFZ GeoForschungsZentrum Potsdam, Helmholtz Centre.

Atacama Desert microbes may hold clues to life on Mars

Picture taken at one of the sites inspected in the Coastal Range of the Atacama Desert. On this picture Professor Azua-Bustos and González-Silva are donning sterile suites and using sterile collecting materials in order to avoid the contamination of the sites studied. Credit: Margarita Azua
Picture taken at one of the sites inspected in the Coastal Range of the Atacama Desert. On this picture Professor Azua-Bustos and González-Silva are donning sterile suites and using sterile collecting materials in order to avoid the contamination of the sites studied. Credit: Margarita Azua

Microbial life on Mars may potentially be transported across the planet on dust particles carried by wind, according to a study conducted in the Atacama Desert in North Chile, a well-known Mars analogue. The findings are published in Scientific Reports.

Armando Azua-Bustos and colleagues investigated whether microbial life could move across the Atacama Desert using on wind-driven dust particles They sought to determine where these microorganisms originate, which may have implications for microbial life in extreme environments.

The authors collected 23 bacterial and eight fungal species from three sampling sites across two regions of the Atacama traversing its hyperarid core, which in addition to its extreme aridity is known for having highly saline/oxidizing soils and extremely high UV radiation. Only three of the species were shared among transects, suggesting that there are different airborne ecosystems in different parts of the desert.

Bacterial and fungal species identified from the samples included Oceanobacillus oncorhynchi, a bacterium first described in aquatic environments, and Bacillus simplex, which originates from plants. These observations indicate that microbes may arrive at the hyperarid core from the Pacific Ocean and the Coastal Range of the desert.

The authors found that microbial cells collected in the morning tended to come from nearby areas, whereas in the afternoon, marine aerosols and microbial life on dust particles were carried by the wind from remote locations. This finding suggests that microbial life is able to efficiently move across the driest and most UV irradiated desert on Earth. Potential microbial life on Mars may similarly spread over, the authors speculate.

Reference:
Aeolian transport of viable microbial life across the Atacama Desert, Chile: Implications for Mars, Scientific Reports (2019). DOI: 10.1038/s41598-019-47394-z

Note: The above post is reprinted from materials provided by Nature Publishing Group.

Underground links between quakes and eruptions of Japan’s biggest active volcano

A picture of Mt. Aso, including locations of eastern and western clusters. Credit: Aso Geopark Promotion Council
A picture of Mt. Aso, including locations of eastern and western clusters. Credit: Aso Geopark Promotion Council

The threat of explosive volcanic eruptions looms over many cities around the world. Earthquakes, another major geological hazard, are known to have some relationships with the occurrence of volcanic eruptions. Although they often precede volcanic events, the mechanisms of these relationships are not yet well understood.

Mount Aso in Kyushu, Japan, is one of the largest active volcanoes in the world and has experienced major earthquakes and eruptions as recently as 2016. Researchers at Kyushu University’s International Institute for Carbon-Neutral Energy Research (I2CNER) have been investigating the relationships among these events to better understand what are happening under the surface and to help predict future disasters. In particular, for a new study published in Geophysical Research Letters, they investigated “very long period” (VLP) seismic waves, which can represent pressure changes in subsurface hydrothermal systems.

“We analyzed continuous VLP seismicity data recorded from January 2015 to December 2016, a period that includes both large earthquakes and eruptions of Mount Aso,” explains lead author of the study Andri Hendriyana. “Using on this dataset, we developed a differential-time back-projection method to accurately locate VLP events, and detected over 18,000 reliable VLP events.”

Using this method, two distinct clusters of these seismic events were identified in the subsurface below the caldera of Mount Aso. For most of the observation period, VLP activity was almost entirely confined to the eastern cluster. However, after the Kumamoto earthquakes on April 2016, VLP activity abruptly shifted to the western cluster for about five months. Then, in September 2016, one month before the largest eruption of Mount Aso during the study period, VLP events migrated back to the eastern cluster. After the large eruption on October 8, 2016, VLP seismicity stopped temporarily. Together, these observations show that VLP events are affected by the occurrence of earthquakes and are related to volcanic eruptions. VLP seismicity is considered to be directly related to pressure variations associated with magmatic activity.

“We interpret the migration of VLP activity after the earthquakes as a response to permeability enhancement or to fractures opening because of extension associated with the Kumamoto earthquakes,” says senior author Takeshi Tsuji. He expects this method to be applied in further studies of Mount Aso as well as other volcanoes worldwide.

“The information obtained from this new monitoring approach could reveal new details about the dynamic behavior within Aso and other volcanoes after earthquakes, and could provide important information for prevention and mitigation of future disasters.”

Reference:
Andri Hendriyana, Takeshi Tsuji. Migration of Very Long Period Seismicity at Aso Volcano, Japan, Associated With the 2016 Kumamoto Earthquake. Geophysical Research Letters, 2019; DOI: 10.1029/2019GL082645

Note: The above post is reprinted from materials provided by Kyushu University, I2CNER.

20-million-year-old skull suggests complex brain evolution in monkeys, apes

An exceptional fossil skull of Chilecebus carrascoensis, a 20-million-year-old primate from the Andes mountains of Chile. Credit: © AMNH/N. Wong and M. Ellison
An exceptional fossil skull of Chilecebus carrascoensis, a 20-million-year-old primate from the Andes mountains of Chile. Credit: © AMNH/N. Wong and M. Ellison

It has long been thought that the brain size of anthropoid primates — a diverse group of modern and extinct monkeys, humans, and their nearest kin — progressively increased over time. New research on one of the oldest and most complete fossil primate skulls from South America shows instead that the pattern of brain evolution in this group was far more checkered. The study, published today in the journal Science Advances and led by researchers from the American Museum of Natural History, the Chinese Academy of Sciences, and the University of California Santa Barbara, suggests that the brain enlarged repeatedly and independently over the course of anthropoid history, and was more complex in some early members of the group than previously recognized.

“Human beings have exceptionally enlarged brains, but we know very little about how far back this key trait started to develop,” said lead author Xijun Ni, a research associate at the Museum and a researcher at the Chinese Academy of Sciences. “This is in part because of the scarcity of well-preserved fossil skulls of much more ancient relatives.”

As part of a long-term collaboration with John Flynn, the Museum’s Frick Curator of Fossil Mammals, Ni spearheaded a detailed study of an exceptional 20-million-year-old anthropoid fossil discovered high in the Andes mountains of Chile, the skull and only known specimen of Chilecebus carrascoensis.

“Through more than three decades of partnership and close collaboration with the National Museum of Chile, we have recovered many remarkable new fossils from unexpected places in the rugged volcanic terrain of the Andes,” Flynn said. “Chilecebus is one of those rare and truly spectacular fossils, revealing new insights and surprising conclusions every time new analytical methods are applied to studying it.”

Previous research by Flynn, Ni, and their colleagues on Chilecebus provided a rough idea of the animal’s encephalization, or the brain size relative to body size. A high encephalization quotient (EQ) signifies a large brain for an animal of a given body size. Most primates have high EQs relative to other mammals, although some primates — especially humans and their closest relatives — have even higher EQs than others. The latest study takes this understanding one step further, illustrating the patterns across the broader anthropoid family tree. The resulting “PEQ” — or phylogenetic encephalization quotient, to correct for the effects of close evolutionary relationships — for Chilecebus is relatively small, at 0.79. Most living monkeys, by comparison, have PEQs ranging from 0.86 to 3.39, with humans coming in at an extraordinary 13.46 and having expanded brain sizes dramatically even compared to nearest relatives. With this new framework, the researchers confirmed that cerebral enlargement occurred repeatedly and independently in anthropoid evolution, in both New and Old World lineages, with occasional decreases in size.

High-resolution x-ray computed tomography (CT) scanning and 3D digital reconstruction of the inside of Chilecebus’ skull gave the research team new insights into the anatomy of its brain. In modern primates, the size of the visual and olfactory centers in the brain are negatively correlated, reflecting a potential evolutionary “trade-off,” meaning that visually acute primates typically have weaker senses of smell. Surprisingly, the researchers discovered that a small olfactory bulb in Chilecebus was not counterbalanced by an amplified visual system. This finding indicates that in primate evolution the visual and olfactory systems were far less tightly coupled than was widely assumed.

Other findings: The size of the opening for the optic nerve suggests that Chilecebus was diurnal. Also, the infolding (sulcus) pattern of the brain of Chilecebus, although far simpler than in most modern anthropoids, possesses at least seven pairs of sulcal grooves and is surprisingly complex for such an ancient primate.

“During his epic voyage on the Beagle, Charles Darwin explored the mouth of the canyon where Chilecebus was discovered 160 years later. Shut out of the higher cordillera by winter snow, Darwin was inspired by ‘scenes of the highest interest’ his vista presented. This exquisite fossil, found just a few kilometers east of where Darwin stood, would have thrilled him,” said co-author André Wyss from the University of California Santa Barbara.

Reference:
Xijun Ni, John J. Flynn, André R. Wyss and Chi Zhang. Cranial endocast of a stem platyrrhine primate and ancestral brain conditions in anthropoids. Science Advances, 2019 DOI: 10.1126/sciadv.aav7913

Note: The above post is reprinted from materials provided by American Museum of Natural History.

Making biominerals: Nature’s recipe is old, evolved more than once

A Desmoceras fossil. A cephalopod that thrived in the early Cretaceous, 146 to 100 million years ago. Note the fossilized biomineral nacre or mother of pearl. Credit: Pupa Gilbert
A Desmoceras fossil. A cephalopod that thrived in the early Cretaceous, 146 to 100 million years ago. Note the fossilized biomineral nacre or mother of pearl. Credit: Pupa Gilbert

In recent years, scientists have teased out many of the secrets of biomineralization, the process by which sea urchins grow spines, mollusks build their shells and corals make their skeletons, not to mention how mammals and other animals make bones and teeth.

The materials that animals make from scratch to build protective shells, razor sharp teeth, load-bearing bones and needlelike spines are some of the hardest and most durable substances known. The recipe for making those materials was one of nature’s closely held secrets, but powerful new analytical tools and microscopes have peeled back much of the mystery, showing, at the nanoscale, exactly how a wide array of animals use precisely the same mechanisms and starter chemicals to make the biomineral structures they depend on.

Now, in a report published today (Aug. 19, 2019) in the Proceedings of the National Academy of Sciences (PNAS), a team led by Pupa Gilbert, a University of Wisconsin–Madison professor of physics, shows that the recipe for making shells, spines, and coral skeletons is not only the same across many modern animal lineages, but is ancient—dating back 550 million years—and evolved independently more than once.

The findings are important because they help stitch together an evolutionary narrative of biomineralization. The fuller picture of a process ubiquitous to animal life on our planet not only tells us something important about our world, but the details may one day be harnessed by humans to produce harder, lighter, more durable materials; tools that never need sharpening; more faithful biomedical implants; and the possibility of human intervention in things like rebuilding the world’s coral reefs.

“The finding that biomineralization evolved independently multiple times, using the same mechanism, tells us that there is a strong physical or chemical reason for doing so,” says Gilbert, a world expert on the process of biomineralization. “If one organism starts making its biomineral that way, it outcompetes all others that either don’t make biomineral or make them differently, it doesn’t get eaten, and gets to transmit that good idea down the lineage.”

The new PNAS report builds on a series of seminal discoveries by Gilbert and her colleagues. In past studies, the Wisconsin physicist has shown that the process of biomineralizations works the same in vastly different classes of animals, ranging from mollusks like abalone, to echinoderms such as sea urchins, and to cnidaria, a large group of animals that includes corals, jellyfish, and sea anemones. These phyla, or broad groups of animals, have no common ancestor that was already biomineralizing, thus they must have evolved biomineralization mechanisms independently. Therefore, Gilbert says, “it is extremely surprising that when they started biomineralizing in the Cambrian (more than 500 million years ago) these three phyla started doing it in precisely the same way: using attachment of amorphous nanoparticles.”

“Biomineralization illustrates both the unity and diversity of nature,” explains Andrew Knoll, a professor of natural history and of Earth and planetary sciences at Harvard University, and a corresponding co-author of the new report. “Biomineralized skeletons may have evolved as many as twenty times within animals alone. That means that no two of these biomineralizing groups share a common ancestor that, itself, fashioned a biomineralized skeleton.”

Gilbert and her colleagues have shown that different biominerals form beginning with amorphous calcium carbonate nanoparticles, which are produced in cells and are the critical starter chemical for all of the materials that form in the biomineralization process, be it the nacre, or mother-of-pearl, that lines an abalone shell or the rock-grinding teeth of a sea urchin. “More than one biomineral forms by these amorphous precursor nanoparticles,” says Gilbert. “It doesn’t matter if it is a sea urchin spicule, a tooth, a spine, nacre, or coral. All of these systems have the same amorphous precursors.

“Amorphous calcium carbonate nanoparticles,” adds Gilbert, “are stabilized in confinement, and reversibly so. Thus, crystals don’t nucleate and grow at the wrong place and time, but they can and do at the right place and time, that is, on the growing surface of a shell, a coral skeleton, a sea urchin spine.”

The ability of many animals to make hard, protective or defensive structures, says Knoll, was likely a broad response to the evolution of carnivores, reflected in a “burst of biomineralization” seen in fossils from the Cambrian period, beginning some 541 million years ago.

The microscopic particles of calcium carbonate produced in animal cells are the same stuff that forms “lime” deposits in pipes and plumbing fixtures. In an animal, it is transformed at the site of biomineralization by attaching to the site and forming crystals in which individual atoms are neatly aligned to make a lattice, a scaffold of sorts for whatever structure an animal is building. The process has been teased out by Gilbert’s team using a novel microscope that employs the soft X-rays produced by synchrotron radiation to observe at the nanoscale how the structures come together as they are formed.

Gilbert’s team went back in time applying the same techniques to probe the deep fossil record in three distinct phyla, or broad groups of related animals, going as far back as 550 million years to sample the oldest known animal biomineral: the Cloudina skeleton with its characteristic series of funnels nestled into one another.

Gilbert notes that while animal remains undergo significant changes in the process of fossilization, the nanoparticle biomineralization signature remains intact and is observed by cracking open fossils and using a scanning electron microscope to probe the site of the fracture for the telltale signs of nanoparticles during the original crystallization process. “We stepped back in time as far as possible, to the very first fossils, and biomineralization by particle attachment looks the same as in modern animals.”

The biomineralization story unraveled by Gilbert and her colleagues may inform the development of novel materials useful for industry.

“We don’t know how to make amorphous calcium carbonate or any other material form a space-filling solid and then crystallize, but cells in marine organisms do,” Gilbert explains. “What we learn from them, we can reproduce in the lab and in industry, and make materials that are far better than the sum of their parts, as all biominerals are.”

Reference:
Pupa U. P. A. Gilbert et al. Biomineralization by particle attachment in early animals, Proceedings of the National Academy of Sciences (2019). DOI: 10.1073/pnas.1902273116

Note: The above post is reprinted from materials provided by University of Wisconsin-Madison.

Scientists discover new way to reconstruct what extinct animals looked like

Fig. 1. 10 million-year-old fossil frog from Libros, Spain and X-ray map showing elevated levels of copper and zinc in the internal organs. Fossil photograph copyright the Natural History Museum, London. X-ray fluorescence map. Credit: Valentina Rossi
Fig. 1. 10 million-year-old fossil frog from Libros, Spain and X-ray map showing elevated levels of copper and zinc in the internal organs. Fossil photograph copyright the Natural History Museum, London. X-ray fluorescence map. Credit: Valentina Rossi

Scientists could be set to reveal the most accurate depictions of ancient vertebrates ever made after a world-first discovery at University College Cork (UCC) in Ireland.

UCC palaeontologists have discovered a new way to reconstruct the anatomy of ancient vertebrate animals, analyzing the chemistry of fossilized melanosomes from internal organs.

The study, published today in the journal Proceedings of the National Academy of Sciences of the United States of America, was led by UCC’s Valentina Rossi and her supervisor Dr. Maria McNamara in collaboration with an international team of chemists from the US and Japan.

The team used cutting-edge synchrotron techniques to analyze the chemistry of the fossil and modern melanosomes using X-rays, allowing them to peer inside the anatomy of fossils and uncover hidden features.

Until recently, most studies on fossil melanin have focused on the skin and feathers, whereas here the pigment is linked to visible color. Unexpectedly, the new study also showed that melanin is abundant in internal organs of modern amphibians, reptiles, birds and mammals, and their fossil counterparts.

“This discovery is remarkable in that it opens up a new avenue for reconstructing the anatomy of ancient animals. In some of our fossils we can identify skin, lungs, the liver, the gut, the heart, and even connective tissue,” said senior author Dr. Maria McNamara.

“What’s more, this suggests that melanin had very ancient functions in regulating metal chemistry in the body going back tens, if not hundreds, of millions of years.”

The team made the initial discovery of internal melanosomes last year on fossil frogs. “After the pilot study, we had a hunch that these features would turn out to be more widespread across vertebrates. But we never guessed that the chemistry would be different in different organs,” Rossi said.

The advent of new synchrotron X-ray analysis techniques “allows us to harness the energy of really fast-moving electrons to detect minute quantities of different metals in the melanosomes.”

The fossils are so well-preserved that even the melanin molecule can be detected.

Reference:
Valentina Rossi et al. Tissue-specific geometry and chemistry of modern and fossilized melanosomes reveal internal anatomy of extinct vertebrates, Proceedings of the National Academy of Sciences (2019). DOI: 10.1073/pnas.1820285116

Note: The above post is reprinted from materials provided by University College Cork.

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